Information for 19-TGGTGCTGTGGG (Motif 26)

A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C T G A A G T C C G T A A C T G A G T C C T G A A T G C A G T C C T G A
p-value:1e-3
log p-value:-7.584e+00
Information Content per bp:1.904
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif33.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets65.7 +/- 40.9bp
Average Position of motif in Background89.7 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGGTGCTGTGGG
----GCTGTG--
 A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGTGCTGTGGG--
----GCTGTGGTTT
 A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTGTGGG-
NCCGTTGCTANGNGN
 A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGGTGCTGTGGG--
---GTCTGTGGTTT
 A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTGTGGG-
NNCGTTGCTATGGNN
 A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

RREB1/MA0073.1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTGCTGTGGG-
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTGTGGG
CCCCCTGCTGTG--
 A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTGTGGG-
TNTCCTGCTGTGNNG
 A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TGGTGCTGTGGG-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGTGCTGTGGG---
NNNANTGCAGTGCNNTT
 A C G T A C G T A G C T A C T G A T C G A G C T A C T G A G T C A C G T A C T G A G C T A C T G A C T G A C T G A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T