Information for 22-AGACAGACAGAC (Motif 28)

C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
Reverse Opposite:
T A C G A G C T T A G C A C G T C T A G A C G T A G T C A C G T A T C G G C A T G T A C G A C T
p-value:1e-2
log p-value:-6.119e+00
Information Content per bp:1.739
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif328.5
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets117.1 +/- 54.9bp
Average Position of motif in Background99.1 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGACAGACAGAC
--CCAGACAG--
 C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AGACAGACAGAC
--CCAGACRSVB
 C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGACAGACAGAC
--BCAGACWA--
 C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGACAGACAGAC--
CAAATCCAGACATCACA
 A C G T A C G T A C G T C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGACAGACAGAC
AGGTGNCAGACAG--
 A C G T A C G T A C G T C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGACAGACAGAC
RHHCAGAGAGGB
 C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGACAGACAGAC
AGGTGHCAGACA---
 A C G T A C G T A C G T C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGACAGACAGAC-
AGCAACAGCCGCACC
 A C G T A C G T C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad4/MA1153.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGACAGACAGAC
-TCTAGACA---
 C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGACAGACAGAC
ATGCCAGACN---
 A C G T C T G A A C T G C G T A A T G C C G T A A C T G T G C A A G T C C G T A A T C G C T G A A T G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T