Information for 24-AAATTTTGGTAA (Motif 29)

C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C C G T A C T G A C G T A C G T A A C G T A C G T A C G T
p-value:1e-1
log p-value:-3.959e+00
Information Content per bp:1.949
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.2 +/- 51.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATTTTGGTAA-
CTAATATTGCTAAA
 A C G T C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATTTTGGTAA-
CTAATATTGCTAAA
 A C G T C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAATTTTGGTAA
NNCTNAATTATGANN-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATTTTGGTAA-
TATAAGTAGGTCAA
 A C G T C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAATTTTGGTAA--
GNNATTTGTCGTAANN
 A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAATTTTGGTAA-
AAAATTGTTATGAA
 A C G T C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAATTTTGGTAA--
CAAATTCCGGAACC
 C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T A C G T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAATTTTGGTAA-
AAATTAGCATAAT
 C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAATTTTGGTAA------
-TAAACTGATAAGAAGAT
 C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

RORB/MA1150.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAATTTTGGTAA-
--AATTAGGTCAC
 C G T A C G T A C G T A A C G T A C G T A G C T A C G T A C T G C T A G A C G T C G T A C G T A A C G T
A C G T A C G T C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C