Information for 2-AAATCACA (Motif 3)

C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A
Reverse Opposite:
G C A T T C A G A G C T C A T G C T G A G A C T A G C T G A C T
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.760
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif1639.8
Percentage of Background Sequences with motif3.38%
Average Position of motif in Targets107.3 +/- 57.8bp
Average Position of motif in Background102.4 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-AAATCACA-
CAAATCACTG
 A C G T C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AAATCACA---
AAATCACAGCA
 C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAATCACA--
AAACCACANN
 C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------AAATCACA---
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAATCACA-
NAAACCACAG
 A C G T C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAATCACA--
AAATCACTGC
 C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAATCACA---
AAACCACAGAN
 C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAATCACA--
AAACCACAGC
 C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Hoxc9/MA0485.1/Jaspar

Match Rank:9
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AAATCACA
GGCCATAAATCAC-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAATCACA-----
AAAAATAACAAACGG
 A C G T A C G T C T G A C T G A C T G A A G C T G T A C C T G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G