Information for 16-AGAGGCTGGTTC (Motif 18)

G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
Reverse Opposite:
A C T G C T G A C T G A A G T C A G T C G T C A C T A G A G T C A G T C A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.859
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets90.0 +/- 57.7bp
Average Position of motif in Background137.2 +/- 48.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAGGCTGGTTC-
-GGGGCGGGGCCR
 G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C A C G T
A C G T C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGCTGGTTC
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A C G T G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTGGTTC-
AGGGGGCGGGGCTG
 A C G T G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGGCTGGTTC
-CATGCGGGTAC
 G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGGCTGGTTC
GGGGGCGGGGCC
 G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGGCTGGTTC
CGTGGGTGGTCC
 G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGCTGGTTC-
GGNGCGNCTGTTNNN
 A C G T A C G T G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGCTGGTTC--
NNNNATGCGGGTNNNN
 A C G T A C G T G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGGCTGGTTC
GGGGGCGGGGC-
 G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAGGCTGGTTC
-TATGCGGGTA-
 G T C A A C T G C G T A A C T G A C T G A G T C A C G T A C T G A C T G A G C T A G C T A G T C
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T