Information for 1-CAGCTGBY (Motif 1)

A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C
Reverse Opposite:
T C A G T C G A G A T C C G T A C A T G T A G C G A C T T A C G
p-value:1e-43
log p-value:-1.005e+02
Information Content per bp:1.681
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif31.88%
Number of Background Sequences with motif4393.0
Percentage of Background Sequences with motif9.15%
Average Position of motif in Targets98.6 +/- 48.5bp
Average Position of motif in Background99.8 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGBY-
HCAGCTGDTN
 A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.97
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGBY
NNGCAGCTGTC
 A C G T A C G T A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGBY
NNACAGCTGC-
 A C G T A C G T A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGBY-
NCAGCTGCTG
 A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CAGCTGBY
CAGCTGTT
 A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGBY
NNGCAGCTGTT
 A C G T A C G T A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGBY-
ACAGCTGTTN
 A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C A C G T
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGBY--
NVCAGCTGBBNN
 A C G T A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGBY---
TGCAGCTGTCCCT
 A C G T A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C A C G T A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGBY-
ACAGCTGTTV
 A C G T A T G C C T G A A T C G G T A C G C A T C T A G A G C T A G T C A C G T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A