Information for 7-GAGTGATTTTCT (Motif 11)

A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A T G A C C G A T A G T C
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.883
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif27.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets94.5 +/- 53.3bp
Average Position of motif in Background97.4 +/- 71.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)3.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAGTGATTTTCT
CNGTGATTTN--
 A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTTTCT
NTTATTGATTTTTT
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTTTCT
ATTATCGATTTTTT
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTTTCT
ANTATCGATTTTTN
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGATTTTCT
NNANTGATTGATNTTN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTTTCT---
TNNNATGATTTCNNCNN
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGTGATTTTCT------
--NNANTTTTATTGGNNN
 A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGATTTTCT
TGCTGTGATTT---
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTGATTTTCT
NNANTGATTGATNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGTGATTTTCT------
-NTNAATTTTATTGNATT
 A C T G C G T A A C T G C G A T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T