Information for 9-GGSCCAGBGCCM (Motif 15)

C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A
Reverse Opposite:
A C G T C T A G A C T G T A G C T G C A A T G C C G A T A C T G A C T G A T G C G T A C G A T C
p-value:1e-5
log p-value:-1.300e+01
Information Content per bp:1.662
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif11.80%
Number of Background Sequences with motif2945.1
Percentage of Background Sequences with motif6.14%
Average Position of motif in Targets89.6 +/- 50.0bp
Average Position of motif in Background99.3 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGSCCAGBGCCM--
TTGGCANNNTGCCAAG
 A C G T A C G T C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGSCCAGBGCCM
GGCCCCGCCCCC
 C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGSCCAGBGCCM
TTGGCATGGTGCCA
 A C G T A C G T C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGSCCAGBGCCM----
-TGCCTGCGYCMCCTT
 C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T A C G T A C G T A C G T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGSCCAGBGCCM
YGGCCCCGCCCC-
 A C G T C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A
A G T C C T A G C T A G A G T C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGSCCAGBGCCM-
-GGCCACRCCCMK
 C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGSCCAGBGCCM----
-GACCACGCCCTTATT
 C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T A C G T A C G T A C G T
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGSCCAGBGCCM--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGSCCAGBGCCM--
AGGTCANTGACCTN
 C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGSCCAGBGCCM-
TGGCAGNCTGCCAG
 A C G T C T A G A C T G T A C G T G A C A G T C G C T A A T C G A C G T A T C G T G A C A G T C T G C A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G