Information for 13-GAAAACTGAAAA (Motif 20)

A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.900e+00
Information Content per bp:1.966
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.5 +/- 64.3bp
Average Position of motif in Background164.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAAAACTGAAAA-
-GAAAMTGAAACT
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAAAACTGAAAA-
-GAAAGTGAAAGT
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

SIX1/MA1118.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAAAACTGAAAA
GTAACCTGATA-
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GAAAACTGAAAA-
-GAAACTGAAACT
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

SIX2/MA1119.1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAAAACTGAAAA
AACTGAAACCTGATAC
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAAAACTGAAAA-
-GAAASYGAAASY
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAAAACTGAAAA---
GGAAANTGAAACTNA
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAAAACTGAAAA-
-GRAASTGAAAST
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAAAACTGAAAA-----
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAAACTGAAAA
GWAAYHTGABMC
 A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C T G A C G T A
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C