Information for 20-GATTGGTCTC (Motif 24)

C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A G T C G T A C C G T A C G T A A C G T A G T C
p-value:1e-2
log p-value:-6.882e+00
Information Content per bp:1.932
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif43.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets90.1 +/- 52.5bp
Average Position of motif in Background105.0 +/- 60.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GATTGGTCTC
NCTGATTGGNN--
 A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTCTC
CCGATTGGCT--
 A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTCTC---
CTGATTGGTCNATTT
 A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGTCTC-
TGATTGGCTANN
 A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGGTCTC-
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGGTCTC-
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTCTC---
NNAATTAGTCACGGT
 A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGTCTC
TTGATTGN----
 A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GATTGGTCTC-
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATTGGTCTC-
-ATTGATTYND
 C T A G C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G A T A G T C A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T