Information for 10-CGTTTATA (Motif 25)

G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C T G
p-value:1e-2
log p-value:-6.163e+00
Information Content per bp:1.907
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif328.0
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets83.1 +/- 56.7bp
Average Position of motif in Background102.3 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------CGTTTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------CGTTTATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTATA---
NTGTTTAYATWW
 A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CGTTTATA
TATTGTTTATT
 A C G T A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTATA--
CBTGTTTAYAWW
 A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTATA
ANCGTTTANN
 A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PB0163.1_Six6_2/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTATA------
ANNNGGATATATCCNNN
 A C G T A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTATA
TTGTTTAC-
 A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTATA---
DGWTTTATGRCN
 A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

FOXK2/MA1103.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTATA-
NNTGTTTACNT
 A C G T A C G T G T A C A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C G T
A G T C C G A T G C A T C T A G C G A T C G A T C A G T G T C A G A T C G C T A G C A T