Information for 17-CTAACCCTAACC (Motif 26)

A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T C T G A C T A G
p-value:1e-2
log p-value:-5.354e+00
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets96.1 +/- 53.1bp
Average Position of motif in Background77.8 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)14.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PSE(SNAPc)/K562-mStart-Seq/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTAACCCTAACC------
WAVTCACCMTAASYDAAAAG
 A C G T A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A T A C G G A C T G A T C T C G A G A T C G A T C T G C A G A C T T C G A C G T A A T C G A G T C C G A T C G T A C G T A G T C A C G T A C T A G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTAACCCTAACC-
-TGACCTTGACCT
 A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAACCCTAACC
GCTAATCC-----
 A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTAACCCTAACC-
-TGACCTTGACCT
 A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAACCCTAACC---
TTAACCCTTTVNKKN
 A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T A C G T A C G T
C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

IRF5/MA1420.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAACCCTAACC-
CCGAAACCGAAACT
 A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTAACCCTAACC-
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTAACCCTAACC-
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAACCCTAACC
CTTAATCCC----
 A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

IRF4/MA1419.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAACCCTAACC--
CCGAAACCGAAACTA
 A C G T A G T C A G C T G T C A C G T A A G T C A G T C A G T C C G A T C G T A C G T A G T A C A G T C A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A