Information for 13-GGTCAAGGGAAT (Motif 11)

C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T
Reverse Opposite:
C G T A G A C T A C G T G T A C A G T C G A T C G C A T C A G T A T C G C G T A A T G C G A T C
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.723
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif139.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets77.1 +/- 40.5bp
Average Position of motif in Background97.9 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTCAAGGGAAT
AGGTCAAGGTCA-
 A C G T C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGTCAAGGGAAT
AGGTCAAGGTCA-
 A C G T C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

RELB/MA1117.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGTCAAGGGAAT--
---NNGGGGAATNC
 C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGTCAAGGGAAT
CAAAGGTCAAGGG---
 A C G T A C G T A C G T A C G T C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGTCAAGGGAAT-
---CCTGGGAAAG
 C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T A C G T
A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGTCAAGGGAAT-
---CSTGGGAAAD
 C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGTCAAGGGAAT--
----NCTGGAATGC
 C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTCAAGGGAAT
-TTCAAGGTCAT
 C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTCAAGGGAAT-
AAGTTCAAGGTCAGC
 A C G T A C G T C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGTCAAGGGAAT
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T C A T G T A C G C G A T T A G C G T C A C G T A C T A G A C T G C A T G T C G A C T G A C G A T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C