Information for 14-AAGGCTTGGA (Motif 19)

G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A
Reverse Opposite:
A G C T A G T C G T A C G C T A C T G A A T C G A G T C T G A C A C G T C A G T
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.543
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.13%
Number of Background Sequences with motif456.7
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets94.1 +/- 51.1bp
Average Position of motif in Background102.5 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGCTTGGA
-AGGCCTNG-
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTGGA
-AAGCTTG--
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTTGGA---
CAAAGGCGTGGCCAG
 A C G T A C G T G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGCTTGGA
TWGTCTGV--
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGGCTTGGA---
---CCTTTGATGT
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGGCTTGGA
--NGCTN---
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGGCTTGGA
-AGGCCTAG-
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGGCTTGGA--
-AGGGTAACAGC
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A A C G T A C G T
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTGGA----
CAGGCCNNGGCCNN
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGGCTTGGA-
AAGGCAAGTGT
 G T C A T G C A A C T G T C A G T A G C A G C T C G A T C A T G T C A G T C G A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T