Information for 8-RMTTWCGT (Motif 21)

C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G A T G C T A C G T A C A T G A G C T
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.750
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.43%
Number of Background Sequences with motif612.1
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets89.9 +/- 66.6bp
Average Position of motif in Background96.4 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:RMTTWCGT--
--TTACGTAA
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Crem/MA0609.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:RMTTWCGT--
TATGACGTAA
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:RMTTWCGT
--TGACGT
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:RMTTWCGT-
-ATGACGTA
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Gmeb1/MA0615.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---RMTTWCGT------
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---RMTTWCGT------
NNNTNGTACGTAANNNN
 A C G T A C G T A C G T C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:RMTTWCGT---
---TACGTGCV
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

JUNB(var.2)/MA1140.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:RMTTWCGT---
-ATGACGTCAT
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T C G A C G A T A C T G C T G A A G T C T C A G G A C T T G A C G C T A A G C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RMTTWCGT----
ACTTTCGTTTCT
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Creb5/MA0840.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RMTTWCGT----
AATGACGTCACC
 C T G A G T A C C G A T C G A T G C T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C