Information for 23-AGCACGCACG (Motif 26)

T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
Reverse Opposite:
G T A C A T C G G C A T A C T G A G T C A C T G A C G T A C T G G T A C A C G T
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.800
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif288.8
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets138.2 +/- 50.8bp
Average Position of motif in Background93.2 +/- 72.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AGCACGCACG
TBGCACGCAA-
 A C G T T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AGCACGCACG
--CACGCA--
 T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGCACGCACG---
AGCGGCACACACGCAA
 A C G T A C G T A C G T T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGCACGCACG
-GCACGTNC-
 T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCACGCACG
-GCACGTAY-
 T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGCACGCACG
BGCACGTA--
 T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCACGCACG-
-GCACGTACCC
 T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF1A/MA1106.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCACGCACG
NNGCACGTNC-
 A C G T T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCACGCACG
GGCACGCGTC
 T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCACGCACG
NNGGTCACGCTC-
 A C G T A C G T A C G T T G C A A C T G G T A C C G T A A G T C A C T G A G T C C G T A A T G C A C T G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T