| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-53 | -1.229e+02 | 0.0000 | 209.0 | 31.96% | 4716.8 | 9.92% | motif file (matrix) |
svg |
| 2 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-53 | -1.227e+02 | 0.0000 | 254.0 | 38.84% | 6777.9 | 14.25% | motif file (matrix) |
svg |
| 3 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-52 | -1.211e+02 | 0.0000 | 242.0 | 37.00% | 6260.2 | 13.16% | motif file (matrix) |
svg |
| 4 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-51 | -1.188e+02 | 0.0000 | 251.0 | 38.38% | 6773.2 | 14.24% | motif file (matrix) |
svg |
| 5 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-51 | -1.181e+02 | 0.0000 | 284.0 | 43.43% | 8473.4 | 17.81% | motif file (matrix) |
svg |
| 6 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-49 | -1.146e+02 | 0.0000 | 255.0 | 38.99% | 7129.9 | 14.99% | motif file (matrix) |
svg |
| 7 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-47 | -1.105e+02 | 0.0000 | 286.0 | 43.73% | 8902.2 | 18.71% | motif file (matrix) |
svg |
| 8 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-45 | -1.046e+02 | 0.0000 | 265.0 | 40.52% | 8045.2 | 16.91% | motif file (matrix) |
svg |
| 9 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-43 | -9.934e+01 | 0.0000 | 310.0 | 47.40% | 10775.2 | 22.65% | motif file (matrix) |
svg |
| 10 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-42 | -9.789e+01 | 0.0000 | 297.0 | 45.41% | 10104.0 | 21.24% | motif file (matrix) |
svg |
| 11 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-38 | -8.974e+01 | 0.0000 | 271.0 | 41.44% | 9058.2 | 19.04% | motif file (matrix) |
svg |
| 12 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-38 | -8.971e+01 | 0.0000 | 208.0 | 31.80% | 5801.0 | 12.19% | motif file (matrix) |
svg |
| 13 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-38 | -8.905e+01 | 0.0000 | 71.0 | 10.86% | 671.4 | 1.41% | motif file (matrix) |
svg |
| 14 |
| Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer | 1e-35 | -8.216e+01 | 0.0000 | 237.0 | 36.24% | 7595.8 | 15.97% | motif file (matrix) |
svg |
| 15 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-34 | -7.974e+01 | 0.0000 | 290.0 | 44.34% | 10675.3 | 22.44% | motif file (matrix) |
svg |
| 16 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-33 | -7.783e+01 | 0.0000 | 270.0 | 41.28% | 9629.4 | 20.24% | motif file (matrix) |
svg |
| 17 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-32 | -7.573e+01 | 0.0000 | 310.0 | 47.40% | 12112.7 | 25.46% | motif file (matrix) |
svg |
| 18 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-30 | -6.958e+01 | 0.0000 | 369.0 | 56.42% | 16319.0 | 34.30% | motif file (matrix) |
svg |
| 19 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-27 | -6.391e+01 | 0.0000 | 165.0 | 25.23% | 4803.5 | 10.10% | motif file (matrix) |
svg |
| 20 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-27 | -6.227e+01 | 0.0000 | 75.0 | 11.47% | 1169.0 | 2.46% | motif file (matrix) |
svg |
| 21 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-23 | -5.339e+01 | 0.0000 | 115.0 | 17.58% | 2934.4 | 6.17% | motif file (matrix) |
svg |
| 22 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-20 | -4.664e+01 | 0.0000 | 487.0 | 74.46% | 27037.8 | 56.84% | motif file (matrix) |
svg |
| 23 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-15 | -3.541e+01 | 0.0000 | 79.0 | 12.08% | 2049.3 | 4.31% | motif file (matrix) |
svg |
| 24 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-9 | -2.155e+01 | 0.0000 | 77.0 | 11.77% | 2611.0 | 5.49% | motif file (matrix) |
svg |
| 25 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.126e+01 | 0.0000 | 206.0 | 31.50% | 10095.6 | 21.22% | motif file (matrix) |
svg |
| 26 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-8 | -1.926e+01 | 0.0000 | 92.0 | 14.07% | 3542.9 | 7.45% | motif file (matrix) |
svg |
| 27 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.551e+01 | 0.0000 | 64.0 | 9.79% | 2329.3 | 4.90% | motif file (matrix) |
svg |
| 28 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-6 | -1.449e+01 | 0.0000 | 32.0 | 4.89% | 849.1 | 1.78% | motif file (matrix) |
svg |
| 29 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-6 | -1.441e+01 | 0.0000 | 55.0 | 8.41% | 1940.7 | 4.08% | motif file (matrix) |
svg |
| 30 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-5 | -1.379e+01 | 0.0000 | 40.0 | 6.12% | 1241.4 | 2.61% | motif file (matrix) |
svg |
| 31 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-5 | -1.336e+01 | 0.0000 | 49.0 | 7.49% | 1704.9 | 3.58% | motif file (matrix) |
svg |
| 32 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-5 | -1.248e+01 | 0.0001 | 89.0 | 13.61% | 3959.2 | 8.32% | motif file (matrix) |
svg |
| 33 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.245e+01 | 0.0001 | 68.0 | 10.40% | 2774.3 | 5.83% | motif file (matrix) |
svg |
| 34 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.183e+01 | 0.0001 | 30.0 | 4.59% | 875.8 | 1.84% | motif file (matrix) |
svg |
| 35 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.173e+01 | 0.0001 | 166.0 | 25.38% | 8799.2 | 18.50% | motif file (matrix) |
svg |
| 36 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-4 | -1.109e+01 | 0.0002 | 50.0 | 7.65% | 1910.1 | 4.02% | motif file (matrix) |
svg |
| 37 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-4 | -1.033e+01 | 0.0004 | 96.0 | 14.68% | 4612.6 | 9.70% | motif file (matrix) |
svg |
| 38 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-4 | -1.032e+01 | 0.0004 | 25.0 | 3.82% | 719.7 | 1.51% | motif file (matrix) |
svg |
| 39 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -1.012e+01 | 0.0004 | 56.0 | 8.56% | 2313.0 | 4.86% | motif file (matrix) |
svg |
| 40 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-4 | -9.614e+00 | 0.0007 | 69.0 | 10.55% | 3097.0 | 6.51% | motif file (matrix) |
svg |
| 41 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-4 | -9.458e+00 | 0.0008 | 20.0 | 3.06% | 536.2 | 1.13% | motif file (matrix) |
svg |
| 42 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.801e+00 | 0.0015 | 78.0 | 11.93% | 3717.4 | 7.81% | motif file (matrix) |
svg |
| 43 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.597e+00 | 0.0018 | 259.0 | 39.60% | 15647.1 | 32.89% | motif file (matrix) |
svg |
| 44 |
| HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer | 1e-3 | -8.573e+00 | 0.0018 | 221.0 | 33.79% | 13031.6 | 27.39% | motif file (matrix) |
svg |
| 45 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.491e+00 | 0.0020 | 17.0 | 2.60% | 446.9 | 0.94% | motif file (matrix) |
svg |
| 46 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.351e+00 | 0.0022 | 56.0 | 8.56% | 2478.6 | 5.21% | motif file (matrix) |
svg |
| 47 |
| Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer | 1e-3 | -8.299e+00 | 0.0023 | 73.0 | 11.16% | 3479.0 | 7.31% | motif file (matrix) |
svg |
| 48 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | -8.178e+00 | 0.0025 | 48.0 | 7.34% | 2042.2 | 4.29% | motif file (matrix) |
svg |
| 49 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -7.777e+00 | 0.0037 | 76.0 | 11.62% | 3725.8 | 7.83% | motif file (matrix) |
svg |
| 50 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.457e+00 | 0.0049 | 73.0 | 11.16% | 3585.3 | 7.54% | motif file (matrix) |
svg |
| 51 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-3 | -7.241e+00 | 0.0060 | 17.0 | 2.60% | 499.5 | 1.05% | motif file (matrix) |
svg |
| 52 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -7.175e+00 | 0.0063 | 25.0 | 3.82% | 888.6 | 1.87% | motif file (matrix) |
svg |
| 53 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.081e+00 | 0.0068 | 140.0 | 21.41% | 7904.3 | 16.62% | motif file (matrix) |
svg |
| 54 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -7.066e+00 | 0.0068 | 49.0 | 7.49% | 2209.8 | 4.65% | motif file (matrix) |
svg |
| 55 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -6.973e+00 | 0.0073 | 70.0 | 10.70% | 3467.0 | 7.29% | motif file (matrix) |
svg |
| 56 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-3 | -6.970e+00 | 0.0073 | 113.0 | 17.28% | 6167.1 | 12.96% | motif file (matrix) |
svg |
| 57 |
| ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.868e+00 | 0.0078 | 91.0 | 13.91% | 4783.2 | 10.05% | motif file (matrix) |
svg |
| 58 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-2 | -6.554e+00 | 0.0105 | 14.0 | 2.14% | 395.1 | 0.83% | motif file (matrix) |
svg |
| 59 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -6.520e+00 | 0.0107 | 69.0 | 10.55% | 3468.4 | 7.29% | motif file (matrix) |
svg |
| 60 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.432e+00 | 0.0115 | 230.0 | 35.17% | 14153.6 | 29.75% | motif file (matrix) |
svg |
| 61 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -6.114e+00 | 0.0155 | 78.0 | 11.93% | 4086.5 | 8.59% | motif file (matrix) |
svg |
| 62 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -5.880e+00 | 0.0193 | 33.0 | 5.05% | 1417.8 | 2.98% | motif file (matrix) |
svg |
| 63 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.865e+00 | 0.0193 | 77.0 | 11.77% | 4063.4 | 8.54% | motif file (matrix) |
svg |
| 64 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.836e+00 | 0.0195 | 27.0 | 4.13% | 1090.2 | 2.29% | motif file (matrix) |
svg |
| 65 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.796e+00 | 0.0200 | 49.0 | 7.49% | 2354.1 | 4.95% | motif file (matrix) |
svg |
| 66 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -5.741e+00 | 0.0208 | 22.0 | 3.36% | 831.5 | 1.75% | motif file (matrix) |
svg |
| 67 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-2 | -5.549e+00 | 0.0249 | 49.0 | 7.49% | 2385.8 | 5.02% | motif file (matrix) |
svg |
| 68 |
| IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer | 1e-2 | -5.509e+00 | 0.0255 | 29.0 | 4.43% | 1228.0 | 2.58% | motif file (matrix) |
svg |
| 69 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.503e+00 | 0.0255 | 117.0 | 17.89% | 6711.4 | 14.11% | motif file (matrix) |
svg |
| 70 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.501e+00 | 0.0255 | 87.0 | 13.30% | 4760.2 | 10.01% | motif file (matrix) |
svg |
| 71 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.463e+00 | 0.0256 | 65.0 | 9.94% | 3376.2 | 7.10% | motif file (matrix) |
svg |
| 72 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.416e+00 | 0.0264 | 13.0 | 1.99% | 402.6 | 0.85% | motif file (matrix) |
svg |
| 73 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.346e+00 | 0.0279 | 14.0 | 2.14% | 453.5 | 0.95% | motif file (matrix) |
svg |
| 74 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.286e+00 | 0.0293 | 27.0 | 4.13% | 1137.1 | 2.39% | motif file (matrix) |
svg |
| 75 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -5.227e+00 | 0.0306 | 4.0 | 0.61% | 50.0 | 0.11% | motif file (matrix) |
svg |
| 76 |
| Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer | 1e-2 | -5.170e+00 | 0.0320 | 153.0 | 23.39% | 9195.3 | 19.33% | motif file (matrix) |
svg |
| 77 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.007e+00 | 0.0372 | 108.0 | 16.51% | 6224.1 | 13.08% | motif file (matrix) |
svg |
| 78 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -4.930e+00 | 0.0396 | 72.0 | 11.01% | 3904.4 | 8.21% | motif file (matrix) |
svg |
| 79 |
| Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -4.911e+00 | 0.0399 | 136.0 | 20.80% | 8112.2 | 17.05% | motif file (matrix) |
svg |
| 80 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -4.879e+00 | 0.0407 | 23.0 | 3.52% | 952.3 | 2.00% | motif file (matrix) |
svg |
| 81 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.860e+00 | 0.0409 | 173.0 | 26.45% | 10640.7 | 22.37% | motif file (matrix) |
svg |
| 82 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -4.772e+00 | 0.0442 | 27.0 | 4.13% | 1185.2 | 2.49% | motif file (matrix) |
svg |
| 83 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.761e+00 | 0.0442 | 37.0 | 5.66% | 1767.1 | 3.71% | motif file (matrix) |
svg |
| 84 |
| ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer | 1e-2 | -4.753e+00 | 0.0442 | 80.0 | 12.23% | 4449.6 | 9.35% | motif file (matrix) |
svg |
| 85 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.649e+00 | 0.0482 | 99.0 | 15.14% | 5709.8 | 12.00% | motif file (matrix) |
svg |