Information for 13-AGCCAGCTGG (Motif 12)

G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G
Reverse Opposite:
A T G C A T G C T G C A C A T G A G T C G A C T T A C G T C A G T A G C C G A T
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.648
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif11.52%
Number of Background Sequences with motif3152.9
Percentage of Background Sequences with motif6.63%
Average Position of motif in Targets102.9 +/- 54.7bp
Average Position of motif in Background99.3 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AGCCAGCTGG---
-GCCAGCTGBTNB
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T A C G T A C G T
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AGCCAGCTGG--
--MCAGCTGKTN
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T A C G T
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A G C T G A T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGCCAGCTGG
NAHCAGCTGD
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AGCCAGCTGG--
--CCAGCTGTTN
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCCAGCTGG
DRVCAGCTGK
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCCAGCTGG
NNVCAGCTGB
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGCTGG-
NNVVCAGCTGBN
 A C G T G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGCCAGCTGG-
-GCCATCTGTT
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGCCAGCTGG-
-SMCATCTGKH
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T
A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGCCAGCTGG--
--NCAGCTGCTG
 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G