Information for 14-GCCCTTTGCT (Motif 13)

C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T
Reverse Opposite:
C T G A C T A G A G T C C G T A C G T A C T G A A C T G A T C G A C T G G T A C
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.789
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif345.6
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets98.6 +/- 54.9bp
Average Position of motif in Background102.3 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GCCCTTTGCT
--CCTTTGTT
 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTTGCT-----
AATCCCTTTGATCTATC
 A C G T A C G T C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTTGCT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCCCTTTGCT--
--CCTTTGTTTT
 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTTGCT-----
ATTTCCTTTGATCTATA
 A C G T A C G T C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCCCTTTGCT--
-NNCTTTGTTNN
 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTTGCT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCCCTTTGCT--
--YCTTTGTTCC
 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCCTTTGCT
GCCATCTGTT
 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCCTTTGCT-
-NCCATTGTTC
 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T A C G T
A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C