Information for 12-AGCCGAAA (Motif 19)

C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A
Reverse Opposite:
C G A T A G C T G C A T T G A C A T C G T A C G G A T C G A C T
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.406
Number of Target Sequences with motif324.0
Percentage of Target Sequences with motif18.20%
Number of Background Sequences with motif6143.1
Percentage of Background Sequences with motif12.91%
Average Position of motif in Targets102.8 +/- 56.3bp
Average Position of motif in Background100.8 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4/MA1419.1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGCCGAAA---
CCGAAACCGAAACTA
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGCCGAAA--
TCGAAACCGAAACT
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCCGAAA----
ATAAACCGAAACCAA
 A C G T A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCGAAA
CAGCC----
 A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGAAA--
GAAAMTGAAACT
 A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCCGAAA---
GAGAACCGAAACTG
 A C G T A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCCGAAA--
AATGGAAAAT
 C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

IRF9/MA0653.1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGCCGAAA--
AACGAAACCGAAACT
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCCGAAA--
GRAASTGAAAST
 A C G T A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

ETV2/MA0762.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCCGAAA--
AACCGGAAATA
 A C G T C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A A C G T A C G T
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A