Information for 25-GRAAAAAAAA (Motif 28)

C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A
Reverse Opposite:
C G A T C G A T A C G T C G A T A C G T A G C T A G C T A G C T G A C T G A T C
p-value:1e-3
log p-value:-7.061e+00
Information Content per bp:1.803
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1499.1
Percentage of Background Sequences with motif3.15%
Average Position of motif in Targets110.3 +/- 55.4bp
Average Position of motif in Background102.1 +/- 69.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF384/MA1125.1/Jaspar

Match Rank:1
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GRAAAAAAAA
TTTAAAAAAAAA
 A C G T A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---GRAAAAAAAA----
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----GRAAAAAAAA
TACTGGAAAAAAAA
 A C G T A C G T A C G T A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GRAAAAAAAA-
AGCCGAAAAAAAAAT
 A C G T A C G T A C G T A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GRAAAAAAAA----
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GRAAAAAAAA---
AACAAACAACAAGAG
 A C G T A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GRAAAAAAAA
GCAATAAAAA
 C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GRAAAAAAAA
GTCATAAAAN
 C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GRAAAAAAAA---
-AAACAAACATTC
 C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GRAAAAAAAA
GGTAATAAAAA
 A C G T C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A