Information for 4-TTGGCACG (Motif 5)

A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
Reverse Opposite:
A G T C A C T G C G A T T A C G T A G C G T A C C T G A T C G A
p-value:1e-28
log p-value:-6.491e+01
Information Content per bp:1.624
Number of Target Sequences with motif413.0
Percentage of Target Sequences with motif23.20%
Number of Background Sequences with motif6398.0
Percentage of Background Sequences with motif13.45%
Average Position of motif in Targets101.7 +/- 54.9bp
Average Position of motif in Background100.2 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCACG
NTTGGCANN
 A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCACG
NNTTGGCANN
 A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCACG
CTTGGCAA-
 A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---TTGGCACG
TACTTGGCAGA
 A C G T A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCACG
GGTTGGCAT-
 A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCACG
VGCTGGCA--
 A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------TTGGCACG--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCACG
NGTGGGCAT-
 A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCACG-
TGATTGGCTANN
 A C G T A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCACG
CCGATTGGCT--
 A C G T A C G T A C G T A C G T A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T