Information for 7-GGCCACTGGCCA (Motif 7)

C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A
Reverse Opposite:
C G A T C T A G T A C G A T G C G T A C G C T A A T C G A C G T C A T G A T C G T A G C G A T C
p-value:1e-20
log p-value:-4.820e+01
Information Content per bp:1.609
Number of Target Sequences with motif188.0
Percentage of Target Sequences with motif10.56%
Number of Background Sequences with motif2362.9
Percentage of Background Sequences with motif4.97%
Average Position of motif in Targets103.1 +/- 56.2bp
Average Position of motif in Background99.0 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGCCACTGGCCA--
--CYWSTGGTCARA
 C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T A C G T
A C G T A C G T G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGCCACTGGCCA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCCACTGGCCA-
TGGCACCATGCCAA
 A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCCACTGGCCA-
-GCCTCAGGGCAT
 C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCCACTGGCCA
NAGGTCANTGACCT
 A C G T A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCCACTGGCCA-
-SCCTSAGGSCAW
 C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACTGGCCA-
TGGCAGNCTGCCAG
 A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCCACTGGCCA-
TCACCTCTGGGCAG
 A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCCACTGGCCA
TAGGGCAAAGGTCA
 A C G T A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCCACTGGCCA-
ANTGCCTGAGGCAAN
 A C G T A C G T C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T