Information for 9-AGTCATATTT (Motif 9)

T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T
Reverse Opposite:
C G T A G C T A G C T A C A G T T C G A C G A T T C A G T C G A G A T C A G C T
p-value:1e-16
log p-value:-3.764e+01
Information Content per bp:1.494
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif5.45%
Number of Background Sequences with motif983.9
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets102.7 +/- 59.7bp
Average Position of motif in Background103.9 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTCATATTT-
-GACATATGTT
 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T A C G T
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTCATATTT
-GTCATN---
 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGTCATATTT-
-ACCATATGTT
 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T A C G T
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTCATATTT-
GKVTCADRTTWC
 A C G T T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATATTT
TGAGTCATTTC-
 A C G T A C G T T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTCATATTT-----
TATCATAATTAAGGA
 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTCATATTT-
-ANCATATGTT
 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T A C G T
A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCATATTT
NNATGAGTCATNN--
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T
C A T G A C G T T C G A G A C T C A T G G T C A T A C G G C A T G T A C C G T A A G C T G T A C C T G A A C G T A C G T

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCATATTT
NNATGAGTCATNN--
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T
A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTCATATTT
--CCATATGT
 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T