Information for 19-TTTTGTTGGCTA (Motif 19)

A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
Reverse Opposite:
C A G T C G T A C T A G A G T C A G T C C G T A C G T A G T A C C G T A C G T A G T C A C G T A
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.898
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.1 +/- 52.3bp
Average Position of motif in Background156.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTTGGCTA
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTTGGCTA
NTTTTATTGG---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTTGGCTA
TTTTTATTGG---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTTGGCTA
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGTTGGCTA
NTTTTATTGG---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTTGTTGGCTA
TTTTATKRGG--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTGTTGGCTA
TTTTATTRGN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGTTGGCTA
NTNTTGTTGTTTGTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTTGTTGGCTA--
--TGATTGGCTANN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTTTGTTGGCTA-
----NTTGGCANN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A G T C A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G