Information for 20-CACTAGAAATTT (Motif 20)

G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G C T A C G T A G T C A C G T C G T A A C T G A C G T C A T G
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.882
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets116.5 +/- 65.2bp
Average Position of motif in Background92.2 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CACTAGAAATTT
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CACTAGAAATTT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CACTAGAAATTT
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACTAGAAATTT
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACTAGAAATTT---
TTCTAGAABNTTCTA
 G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T A C G T A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACTAGAAATTT-
TTCTAGAACGTTC
 G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T A C G T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACTAGAAATTT-
TTCTAGAACGTTC
 G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T A C G T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACTAGAAATTT
TATCATTAGAACGCT
 A C G T A C G T A C G T G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACTAGAAATTT
CCACTTGAA----
 A C G T G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACTAGAAATTT-
-ACTATAAATAGA
 G A T C C G T A G T A C A C G T C G T A A C T G G T C A C T G A C G T A C G A T C G A T A C G T A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A