Information for 24-SGASWCGGAT (Motif 23)

A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A T G C A T C G C G A T A T C G A C G T A G T C A T C G
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.799
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif60.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets100.0 +/- 47.7bp
Average Position of motif in Background99.1 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SGASWCGGAT---
--ACCCGGATGTA
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---SGASWCGGAT---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:SGASWCGGAT---
-----NGGATTAN
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SGASWCGGAT---
-----CGGATTAN
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:SGASWCGGAT--------
-NNAAGGGATTAACGANT
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--SGASWCGGAT----
AANNATCCGGATGTNN
 A C G T A C G T A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SGASWCGGAT------
CTACTAGGATGTNNTN
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:SGASWCGGAT----
----GNGGATTAGN
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SGASWCGGAT---
---CNGTGATTTN
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:SGASWCGGAT-----
AAAAACGGATTATTG
 A T G C C T A G G T C A A T G C C G T A A T G C A T C G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G