Information for 5-TGTSGTCW (Motif 5)

A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T
Reverse Opposite:
C G T A C T A G C G T A A G T C A T G C C T G A G T A C C G T A
p-value:1e-19
log p-value:-4.505e+01
Information Content per bp:1.715
Number of Target Sequences with motif222.0
Percentage of Target Sequences with motif18.06%
Number of Background Sequences with motif4606.7
Percentage of Background Sequences with motif9.53%
Average Position of motif in Targets95.6 +/- 55.2bp
Average Position of motif in Background99.2 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TGTSGTCW-
CTGTGGTTTN
 A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---TGTSGTCW-
NNHTGTGGTTWN
 A C G T A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--TGTSGTCW
GCTGTGGTTT
 A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TGTSGTCW
NNTGTGGTTT
 A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---TGTSGTCW
GTCTGTGGTTT
 A C G T A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TGTSGTCW
TTTGCGGTTT
 A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGTSGTCW
TTGCGGTTT
 A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TGTSGTCW--
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTSGTCW-
NRRTGACGTCAT
 A C G T A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTSGTCW-
NGRTGACGTCAY
 A C G T A C G T A C G T A C G T A C T G A G C T T A C G C T A G A C G T G A T C C G A T A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T