Information for 9-CCCTCTGTGGCT (Motif 9)

A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T
Reverse Opposite:
C T G A T C A G A T G C G T A C C T G A T G A C C G T A T C A G G C T A C T A G C T A G T C A G
p-value:1e-14
log p-value:-3.283e+01
Information Content per bp:1.706
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif6.02%
Number of Background Sequences with motif1026.1
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets99.4 +/- 52.3bp
Average Position of motif in Background102.2 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CCCTCTGTGGCT-
--GTCTGTGGTTT
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCCTCTGTGGCT-
---NNTGTGGTTT
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCCTCTGTGGCT-
---GCTGTGGTTT
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T A C G T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCCTCTGTGGCT--
--NNHTGTGGTTWN
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCCTCTGTGGCT--
----CTGTGGTTTN
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTGTGGCT
NNNCCATCTGTNN--
 A C G T A C G T A C G T A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGTGGCT
ACCATCTGTT---
 A C G T A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTGTGGCT
VCCTCTCTGDDY--
 A C G T A C G T A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCCTCTGTGGCT
---GCTGTG---
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCCTCTGTGGCT
-CCTTTGTT---
 A G T C G A T C G A T C C G A T A G T C G C A T A C T G G A C T C A T G T A C G A G T C G A C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T