Information for 6-TGGCACAGGGCC (Motif 14)

C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
Reverse Opposite:
C A T G A C T G G A T C G A T C G A T C A C G T A T C G C G A T T A C G T G A C G T A C G C T A
p-value:1e-12
log p-value:-2.879e+01
Information Content per bp:1.698
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif1136.0
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets99.2 +/- 53.4bp
Average Position of motif in Background98.9 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGGCACAGGGCC---
TTGGCANNNTGCCAAG
 A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C A C G T A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGGCACAGGGCC--
TGGCACCATGCCAA
 C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCACAGGGCC-
CTGGCAGNCTGCCA
 A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGCACAGGGCC
NTTGGCANN-----
 A C G T A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGCACAGGGCC
CCAGGAACAG----
 A C G T A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACAGGGCC
NNTTGGCANN-----
 A C G T A C G T A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACAGGGCC
GGTTGGCAT------
 A C G T A C G T A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCACAGGGCC
VGCTGGCA-------
 A C G T A C G T A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCACAGGGCC-
TTTGCACACGGCAC
 A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGCACAGGGCC
TAGGGCAAAGGTCA
 A C G T A C G T C G A T C A T G A C T G A T G C G C T A T A G C T G C A C T A G C T A G C T A G T G A C G T A C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A