Information for 13-AGCAMAGC (Motif 15)

C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C
Reverse Opposite:
T C A G G T A C C G A T C A G T C A G T C A T G G A T C G C A T
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.534
Number of Target Sequences with motif656.0
Percentage of Target Sequences with motif26.00%
Number of Background Sequences with motif9637.7
Percentage of Background Sequences with motif20.66%
Average Position of motif in Targets100.2 +/- 55.3bp
Average Position of motif in Background100.2 +/- 67.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCAMAGC
CAGCC----
 A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AGCAMAGC---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCAMAGC
TATGCAAATC
 A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCAMAGC------
GAGCACAGCAGGACA
 A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------AGCAMAGC-
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCAMAGC-
AAAACAAAGAA
 A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCAMAGC--
GGAACAGCCG
 C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C A C G T A C G T
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGCAMAGC
GTCAGCANNTN
 A C G T A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCAMAGC
ATATGCAAAT-
 A C G T A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCAMAGC-
ACTAGCCAATCA
 A C G T A C G T A C G T C G T A C T A G G T A C G T C A G T C A G C T A C A T G A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A