Information for 16-AGBGTGTTAT (Motif 20)

T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T
Reverse Opposite:
C G T A C G A T C G T A C G T A A G T C C G T A A G T C T G A C A G T C A C G T
p-value:1e-7
log p-value:-1.626e+01
Information Content per bp:1.778
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif23.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets105.6 +/- 48.6bp
Average Position of motif in Background103.0 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGBGTGTTAT------
-NNNTGTTGTTGTTNG
 T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGBGTGTTAT----
NCNTTTGTTATTTNN
 A C G T T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

KLF4/MA0039.3/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGBGTGTTAT
NNAGGGTGTGG-
 A C G T A C G T T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T
C T A G T A G C C G T A C T A G A C T G T C A G G A C T C A T G A G C T A C T G A C T G A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGBGTGTTAT------
NNANTTTTATTGGNNN
 T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

GATA3/MA0037.3/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGBGTGTTAT--
----TCTTATCT
 T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G A T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGBGTGTTAT--
--NNTCTTATCT
 T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A C G T A G T C A G C T C G A T C G T A A C G T A G T C C G A T

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGBGTGTTAT----
AATAGGGTATCATATAT
 A C G T A C G T A C G T T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGBGTGTTAT----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGBGTGTTAT--
----YSTTATCT
 T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGBGTGTTAT--
----TCTTATCT
 T G C A A C T G A C T G C T A G A C G T C T A G C G A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T