Information for 22-AGAMGTGATA (Motif 26)

C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C C G T A A G T C A C G T A C G T G T A C A C G T
p-value:1e-4
log p-value:-9.554e+00
Information Content per bp:1.907
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif39.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets108.7 +/- 52.3bp
Average Position of motif in Background107.5 +/- 54.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
ANANGTGATACCCCATT
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
ANNNATGATACCCCATC
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
ANANGTGATACCCTATN
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
ANANGTGATACCCTATN
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
ANANNTGATACCCTATN
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
ANANNTGATACCCNATN
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGAMGTGATA-
CGGAAGTGAAAC
 A C G T C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAMGTGATA--
GGAAGTGAAAST
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-------
AATNTTGATACCCTATN
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGAMGTGATA-----
NNATNTGATANNNNN
 C G T A A C T G G T C A G T C A A C T G A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T