Information for 19-GCACCCACATAC (Motif 27)

A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T A C T G G T A C
p-value:1e-3
log p-value:-8.627e+00
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets79.0 +/- 55.5bp
Average Position of motif in Background162.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCACCCACATAC
-TACCCGCATN-
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCACCCACATAC
GTACCCGCATN-
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCACCCACATAC
-CRCCCACGCA-
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCACCCACATAC--
TCGTACCCGCATCATT
 A C G T A C G T A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCACCCACATAC
NWAACCACADNN
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCACCCACATAC
YCCGCCCACGCN-
 A C G T A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCACCCACATAC---
---ACCACATCCTGT
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCACCCACATAC
-AAACCACAGAN
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCACCCACATAC
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCACCCACATAC
-AAACCACANN-
 A C T G A G T C G T C A A G T C A G T C A G T C C G T A G T A C C G T A A C G T C T G A A G T C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T