Information for 23-GAGTTGCACT (Motif 28)

A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A G T C C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.546e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.4 +/- 54.1bp
Average Position of motif in Background125.2 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTGCACT-
GGGATTGCATNN
 A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAGTTGCACT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGTTGCACT---
-ASTTTCACTTCC
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGTTGCACT---
-ACTTTCACTTTC
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGCACT
NNCAGTTGNN--
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGTTGCACT---
-AGTTTCAGTTTC
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGTTGCACT---
---TTGAMCTTTG
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGTTGCACT---
-ACTTTCACTTTC
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGTTGCACT---
-ASTTTCASTTYC
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGTTGCACT---
-AGTTTCAKTTTC
 A C T G C G T A A C T G A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C