Information for 6-TYGKAACA (Motif 8)

G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A
Reverse Opposite:
G A C T T C A G A C G T C G A T G T A C G A T C T C G A C G T A
p-value:1e-15
log p-value:-3.638e+01
Information Content per bp:1.525
Number of Target Sequences with motif572.0
Percentage of Target Sequences with motif22.67%
Number of Background Sequences with motif7635.4
Percentage of Background Sequences with motif16.37%
Average Position of motif in Targets102.3 +/- 56.0bp
Average Position of motif in Background100.1 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TYGKAACA-
CCAGGAACAG
 A C G T G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TYGKAACA--
TTGCAACATN
 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TYGKAACA--
----AACAAT
 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TYGKAACA---
-TGGAACAGMA
 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TYGKAACA----
NTTNAGAACAATTA
 A C G T A C G T G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TYGKAACA-------
TTTAGAACAATAAAAT
 A C G T G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TYGKAACA--
NTTGATACATT
 A C G T G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TYGKAACA----
--RNAACAATGG
 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TYGKAACA--
---NAACAAT
 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TYGKAACA----
--GGAACAGCCG
 G C A T A G C T C T A G C A T G G C T A T G C A A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G