Information for 1-GCTAAAAATAGC (Motif 1)

A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
Reverse Opposite:
C A T G A G T C A C G T C G T A C G A T C G A T G A C T G C A T G C A T C T G A C T A G T G A C
p-value:1e-81
log p-value:-1.873e+02
Information Content per bp:1.650
Number of Target Sequences with motif153.0
Percentage of Target Sequences with motif18.32%
Number of Background Sequences with motif1187.8
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets103.3 +/- 54.1bp
Average Position of motif in Background101.4 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:GCTAAAAATAGC
GCTAAAAATAGC
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GCTAAAAATAGC
TCTAAAAATAGA
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GCTAAAAATAGC
DCYAAAAATAGM
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GCTAAAAATAGC
GCTATAAATAGC
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCTAAAAATAGC
ACTATAAATAGA
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GCTAAAAATAGC
KCCAAAAATAGC
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--GCTAAAAATAGC-
ATGCTAAAAATAGAA
 A C G T A C G T A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.91
Offset:1
Orientation:forward strand
Alignment:GCTAAAAATAGC
-CCAAAAATAG-
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GCTAAAAATAGC
-CCATATATGG-
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCTAAAAATAGC----
-GTATAAAAGGCGGGG
 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G