Information for 12-CAGGGCTT (Motif 23)

A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A G T C A A C T G A G T C A G T C A G T C A C G T C T A G
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.922
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.62%
Number of Background Sequences with motif1973.1
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets101.6 +/- 56.5bp
Average Position of motif in Background98.3 +/- 65.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGCTT
CNAGGCCT-
 A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGCTT-
GCAGTGATTT
 A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAGGGCTT-----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGGGCTT-
-NGGGATTA
 A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T A C G T
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGGGCTT
---NGCTN
 A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGCTT-
TGCTGTGATTT
 A C G T A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:7
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CAGGGCTT
YCCDNTCCAGGTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGGGCTT
WDNCTGGGCA-
 A C G T A C G T A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGGGCTT--
CNGTGATTTN
 A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGCTT
CACAGN----
 A C G T A C G T A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T