Information for 24-VNGGCGSGGCAR (Motif 27)

T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
Reverse Opposite:
G A C T A C G T C T A G G A T C A G T C T A G C A G T C C T A G T G A C T G A C A G C T A C G T
p-value:1e-4
log p-value:-1.137e+01
Information Content per bp:1.425
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets121.4 +/- 53.5bp
Average Position of motif in Background88.3 +/- 46.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-VNGGCGSGGCAR
GGGGGCGGGGCC-
 A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:VNGGCGSGGCAR
GGGGCGGGGCCR
 T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---VNGGCGSGGCAR-
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----VNGGCGSGGCAR-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--VNGGCGSGGCAR
RGKGGGCGGAGC--
 A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:6
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---VNGGCGSGGCAR
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--VNGGCGSGGCAR-
CAAAGGCGTGGCCAG
 A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--VNGGCGSGGCAR
AGGGGGCGGGGCTG
 A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----VNGGCGSGGCAR
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:VNGGCGSGGCAR
DGGGYGKGGC--
 T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T