Information for 5-CCCCCTACTGGC (Motif 4)

T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C
Reverse Opposite:
C T A G A T G C T G A C C T G A A T C G A G C T G T C A T C A G C T A G C A T G A C T G A C T G
p-value:1e-19
log p-value:-4.590e+01
Information Content per bp:1.719
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.38%
Number of Background Sequences with motif1055.4
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets105.0 +/- 49.2bp
Average Position of motif in Background97.5 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.83
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCTACTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCCTACTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------CCCCCTACTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCCCCTACTGGC
NGTGCCCCCTGGNG--
 A C G T A C G T A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C
T C A G T A C G A G C T C A T G T G A C A T G C T G A C A G T C A T G C A C G T T C A G A T C G A G C T A T C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCCCCTACTGGC
CCCCCTGCTGTG
 T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTACTGGC-
GGCCYCCTGCTGDGH
 A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCTACTGGC
TTCCCCCTAC----
 A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTACTGGC-
GACCCCCCGCTGTGC
 A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTACTGGC
GACCCCCCGCTGTG
 A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTACTGGC-
GACCCCCCGCTGCGC
 A C G T A C G T T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C