Information for 11-TGATTTTCTGAG (Motif 13)

A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.959
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.1 +/- 58.2bp
Average Position of motif in Background105.2 +/- 50.1bp
Strand Bias (log2 ratio + to - strand density)4.1
Multiplicity (# of sites on avg that occur together)3.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGATTTTCTGAG----
NAATTTTACGAGNTNN
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGATTTTCTGAG
--ATTTCCTGTN
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGATTTTCTGAG----
ANATTTTACGAGNNNN
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGATTTTCTGAG
CNGTGATTTN-----
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGATTTTCTGAG-
--NTTTTACGAGN
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGATTTTCTGAG-
---TTTTATKRGG
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGATTTTCTGAG
NTTATTGATTTTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGATTTTCTGAG-
---TTTTATTRGN
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGATTTTCTGAG
--ATTTCCTGTN
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGATTTTCTGAG
--NTTTTATTGG
 A C G T A C T G C G T A A C G T A C G T A C G T C G A T G T A C A C G T A C T G C G T A A T C G
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G