Information for 15-CCTAACCCTAAC (Motif 20)

A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T C G T A C T A G A C T G A T C G A C G T A C G T C G T A C T A G A C T G
p-value:1e-5
log p-value:-1.276e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets98.2 +/- 42.1bp
Average Position of motif in Background89.8 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)4.3
Multiplicity (# of sites on avg that occur together)4.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
GCTAATCC----
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTAACCCTAAC----
-TTAACCCTTTVNKKN
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
CTTAATCCC---
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTAACCCTAAC--
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTAACCCTAAC--
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTAACCCTAAC
-YTAATCCY---
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
NYTAATCCYB--
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

PSE(SNAPc)/K562-mStart-Seq/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTAACCCTAAC-------
WAVTCACCMTAASYDAAAAG
 A C G T A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A T A C G G A C T G A T C T C G A G A T C G A T C T G C A G A C T T C G A C G T A A T C G A G T C C G A T C G T A C G T A G T C A C G T A C T A G

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTAACCCTAAC
CCTAATCCGC--
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTAACCCTAAC
-TTAATCCT---
 A G T C A G T C A C G T C G T A C G T A A T G C G T A C A G T C A C G T C G T A C G T A A G T C
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T