Information for 19-CCTGTTAGTAGG (Motif 25)

A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T C G T A A G T C A G C T G T C A C G T A A G T C C G T A A C T G A C T G
p-value:1e-4
log p-value:-9.483e+00
Information Content per bp:1.942
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.8 +/- 61.6bp
Average Position of motif in Background115.9 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTGTTAGTAGG-
-CTGTTGCTAGGS
 A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGTTAGTAGG---
GCACAYAGTAGGKCY
 A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGTTAGTAGG
GCTGTG------
 A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTTAGTAGG
AAGCACCTGTCAATAT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTGTTAGTAGG----
NNTGTAGGTAGCANNT
 A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTTAGTAGG
ACTTCCTGTT------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTTAGTAGG
AAAGACCTGTCAATAC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTTAGTAGG
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTGTTAGTAGG
GCTGTCAA----
 A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTGTTAGTAGG
GCTATTTATAGC
 A G T C A G T C A C G T A C T G A C G T A C G T C T G A A C T G A C G T C G T A A C T G A C T G
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C