Information for 18-GTAGTATAAC (Motif 27)

A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T A C G T C G T A A C G T C G T A A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.802e+00
Information Content per bp:1.944
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.7 +/- 52.0bp
Average Position of motif in Background71.8 +/- 48.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTAGTATAAC---
CCGTATTATAAACAA
 A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTAGTATAAC----
NCGTATTATAATCNTA
 A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAGTATAAC
VTTRCATAAY
 A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTAGTATAAC
GGTCGTAAAAA
 A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0047.1_Hoxa11/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTAGTATAAC--
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTAGTATAAC--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAGTATAAC
AGTCGTAAAAA
 A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTAGTATAAC---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTAGTATAAC--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTAGTATAAC--
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T A G A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A