Information for 22-CCATGCTGGCCA (Motif 29)

A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.105e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets130.3 +/- 32.3bp
Average Position of motif in Background114.4 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCATGCTGGCCA--
--CYWSTGGTCARA
 A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCTGGCCA-
TCNCCTGCTGNGNNN
 A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCATGCTGGCCA
-CCTGCTGAGH-
 A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCATGCTGGCCA
--WDNCTGGGCA
 A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCATGCTGGCCA
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCTGGCCA
CCCCCTGCTGTG--
 A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCTGGCCA-
NNTCCTGCTGTGNNN
 A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCATGCTGGCCA
-TATGCGGGTA-
 A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCTGGCCA-
TNTCCTGCTGTGNNG
 A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CCATGCTGGCCA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A