Information for 6-AGTGTAGAAT (Motif 7)

C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T
Reverse Opposite:
C T G A A G C T A C G T A G T C A G C T C G T A G A T C C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.821
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif544.7
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets96.5 +/- 61.8bp
Average Position of motif in Background103.8 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTGTAGAAT
TGTCTAGA--
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTGTAGAAT-----
NNGATCTAGAACCTNNN
 A C G T A C G T C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGTGTAGAAT
CGTCTAGACA
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTGTAGAAT----
NGNTCTAGAACCNGV
 A C G T C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTGTAGAAT---
--TGTGGATTNNN
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGTAGAAT--
NNTGTGGATTSS
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGTGTAGAAT---
TNAGTTTCGATTTTN
 A C G T A C G T C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTGTAGAAT------
-GTATAAAAGGCGGGG
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTGTAGAAT----
ANTATCGATTTTTN
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTGTAGAAT------
-GTATAAAAGGCGGGG
 C G T A C T A G A C G T C T A G A C G T C T G A C T A G C G T A T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G