Information for 1-GCCCTCTDGTGG (Motif 1)

C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G
Reverse Opposite:
A G T C A G T C C T G A A T G C G A C T G T C A A C T G C T G A A C T G A C T G A C T G G A T C
p-value:1e-40
log p-value:-9.335e+01
Information Content per bp:1.775
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif106.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets91.2 +/- 50.9bp
Average Position of motif in Background98.6 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTDGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.88
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTDGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTDGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTCTDGTGG
NGTGCCCCCTGGNG-
 A C G T A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G
T C A G T A C G A G C T C A T G T G A C A T G C T G A C A G T C A T G C A C G T T C A G A T C G A G C T A T C G A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTDGTGG
NTGCCCANNGGTNA
 A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCTCTDGTGG
GCCATCTGTT--
 C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GCCCTCTDGTGG--
--------GTGGAT
 C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTCTDGTGG
GCNGCCATCTTG---
 A C G T A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTDGTGG-
CACCCCCGGGGGGG
 A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTCTDGTGG
GCCGCCATCTTG---
 A C G T A C G T A C G T C T A G G T A C A G T C G T A C G A C T G T A C A C G T C T G A A T C G A G C T A C T G T A C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T