Information for 10-GTGTCACTGACA (Motif 12)

C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A
Reverse Opposite:
C A G T A C T G C A G T A G T C C G T A A T C G A C G T A C T G G T C A T G A C G T C A G A T C
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.668
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif8.77%
Number of Background Sequences with motif1332.2
Percentage of Background Sequences with motif2.79%
Average Position of motif in Targets103.5 +/- 51.4bp
Average Position of motif in Background98.7 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCACTGACA-
NAGGTCANTGACCT
 A C G T C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGTCACTGACA----
CAATCACTGGCAGAAT
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PBX2/MA1113.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTGTCACTGACA--
--GTGATTGACAGG
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T A C G T
A C G T A C G T T C A G C G A T C A T G C T G A A C G T C A G T A C T G C T G A A G T C C T G A A T C G T A C G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGTCACTGACA
RGGGCACTAACY
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTGTCACTGACA--
--BTGABTGACAGS
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTGTCACTGACA-
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GTGTCACTGACA-
------TTGACAG
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTGTCACTGACA--
--NTGATTGACAGN
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCACTGACA--
GGGGTCAATGACCTN
 A C G T C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTGTCACTGACA---
-----VBTGWCAGCB
 C T A G C A G T A C T G C A G T T G A C G T C A A T G C C G A T T C A G G T C A T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C