Information for 12-CAAGAAARCCCT (Motif 14)

G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T
Reverse Opposite:
C G T A A C T G A C T G A C T G A G C T A C G T A C G T C G A T A G T C G A C T A C G T A C T G
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.809
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif79.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets90.1 +/- 64.3bp
Average Position of motif in Background95.8 +/- 66.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAAGAAARCCCT
--GGAAANCCCC
 G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CAAGAAARCCCT
--GGAAATCCCC
 G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CAAGAAARCCCT
--GGAAATTCCC
 G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAAGAAARCCCT
----TAATCCCN
 G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAAGAAARCCCT-
-GGGAAATCCCCN
 G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAGAAARCCCT---
GATAATTAATCCCTCTT
 A C G T A C G T G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAGAAARCCCT
NACAGGAAAT----
 A C G T A C G T G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAGAAARCCCT---
GANNATTAATCCCTNNN
 A C G T A C G T G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAAGAAARCCCT---
NANANTTAATCCCNNNN
 A C G T A C G T G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAAGAAARCCCT---
NNNAATTAATCCCCNCN
 A C G T A C G T G T A C G T C A C T G A A C T G C G T A C G T A C G T A C T G A A G T C A G T C A G T C G A C T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T