Information for 13-GCCAGGGCAGAC (Motif 15)

A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G C T A C T G A T G C G T A C A G T C A C G T A C T G A C T G A T G C
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.893
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets114.9 +/- 59.7bp
Average Position of motif in Background103.5 +/- 46.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GCCAGGGCAGAC----
------CCAGACRSVB
 A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCAGGGCAGAC
WDNCTGGGCA---
 A C G T A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCAGGGCAGAC--
------CCAGACAG
 A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCAGGGCAGAC
ACATGCCCGGGCAT--
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GCCAGGGCAGAC--
------BCAGACWA
 A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCAGGGCAGAC------
-CAAATCCAGACATCACA
 A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCCAGGGCAGAC-
---ATGCCAGACN
 A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCCAGGGCAGAC
CGTGCCAAG------
 A C G T A C G T A C G T A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCAGGGCAGAC
-TNNGGGCAG--
 A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGCAGAC---
TGCCAAAATAAACANN
 A C G T A T C G A G T C A G T C C G T A A C T G A C T G A T C G A G T C C T G A A C T G T G C A A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A